Description : RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component
Gene families : OG0000709 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000709_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00200390 | HEN2,... | RNA processing.RNA decay.exosome complex.associated... | 0.04 | OrthoFinder output from all 47 species | |
AT1G59760 | No alias | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G06990 | HEN2 | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G46960 | No alias | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g022453 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g01540 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g17654 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g07168 | No alias | group-II intron splicing RNA helicase *(ISE2) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g07801 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Als_g01202 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g09338 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene40704.t1 | Aspi01Gene40704 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.08G061100.1 | HEN2, Ceric.08G061100 | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.15G051600.1 | Ceric.15G051600 | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020723.108 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g18967 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01024809001 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g06500.1 | LOC_Os02g06500 | RNA helicase component SKI2 of SUPERKILLER (SKI)... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g07500.1 | HEN2, LOC_Os11g07500 | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g02309 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
MA_33462g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH9 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g05510.1 | No alias | RNA helicase component SKI2 of SUPERKILLER (SKI)... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g03900.1 | HEN2 | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Mp6g05580.1 | No alias | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g17493 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g01063 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c14_23340V3.1 | Pp3c14_23340 | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.01 | OrthoFinder output from all 47 species | |
Sam_g10538 | No alias | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g103080.3.1 | Solyc01g103080 | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g005990.4.1 | Solyc06g005990 | DExH-box ATP-dependent RNA helicase DExH11... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g11434 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013693_P002 | Zm00001e013693 | RNA helicase component SKI2 of SUPERKILLER (SKI)... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e036710_P004 | Zm00001e036710 | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |