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Aliases : LHCA5
Description : Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00264770 | CAB4, LHCA4,... | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G19150 | LHCA2*1, LHCA6 | photosystem I light harvesting complex gene 6 | 0.11 | OrthoFinder output from all 47 species | |
| AT1G45474 | LHCA5 | photosystem I light harvesting complex gene 5 | 0.09 | OrthoFinder output from all 47 species | |
| AT3G47470 | CAB4, LHCA4 | light-harvesting chlorophyll-protein complex I subunit A4 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G61470 | LHCA2 | photosystem I light harvesting complex gene 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g001938 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g113731 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Aev_g11818 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13249 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g00950 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00983 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g21633 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03556 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08471 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g12147 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g13138 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g36261 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene25390.t1 | LHCA5, Aspi01Gene25390 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.09 | OrthoFinder output from all 47 species | |
| Aspi01Gene65950.t1 | LHCA2, Aspi01Gene65950 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0551.g076608 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g01741 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.09 | OrthoFinder output from all 47 species | |
| Cba_g06305 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g15852 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g36933 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G073900.1 | LHCA2, Ceric.22G073900 | component *(LHCa2) of LHC-I complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G031700.1 | LHCA2, Ceric.28G031700 | component *(LHCa2) of LHC-I complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.33G037200.1 | CAB4, LHCA4,... | component *(LHCa4) of LHC-I complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.33G046000.1 | CAB4, LHCA4,... | component *(LHCa4) of LHC-I complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.37G034400.1 | LHCA5, Ceric.37G034400 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.05 | OrthoFinder output from all 47 species | |
| Cre06.g272650 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g278213 | CAB4, LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Cre10.g425900 | CAB4, LHCA4 | Chlorophyll a-b binding protein 4, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Cre10.g452050 | CAB4, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| Cre16.g687900 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21646 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02371 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g09352 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g45197 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g02029 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Dde_g08226 | LHCA5 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g16731 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g20973 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009498001 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01010483001 | LHCA2 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01015045001 | LHCA2*1, LHCA6 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_08408 | CAB4, LHCA4 | component LHCa4 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25594 | LHCA5 | Photosystem I chlorophyll a/b-binding protein 5,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32082 | LHCA2 | component LHCa2 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g52650.1 | LHCA5, LOC_Os02g52650 | component LHCa5 of LHC-I complex | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os07g38960.1 | LHCA2, LOC_Os07g38960 | component LHCa2 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g33820.1 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g00387 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g12015 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g17260 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g34099 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.03 | OrthoFinder output from all 47 species | |
| MA_65346g0010 | CAB4, LHCA4 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g07840.1 | CAB4, LHCA4 | component LHCa4 of LHC-I complex | 0.05 | OrthoFinder output from all 47 species | |
| Mp8g13180.1 | LHCA2 | component LHCa2 of LHC-I complex | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g01556 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04666 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g12268 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g00735 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g07782 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g07783 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43266 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g17334 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g19526 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g19768 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g08290 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c20_23240V3.1 | LHCA2, Pp3c20_23240 | photosystem I light harvesting complex gene 2 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_11854V3.1 | LHCA5, Pp3c4_11854 | photosystem I light harvesting complex gene 5 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g12016 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g18284 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g016013 | LHCA2 | component *(LHCa2) of LHC-I complex & original... | 0.09 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0074.g017225 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10927 | No alias | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16961 | No alias | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18948 | No alias | linker protein *(LHCa5) between PS-I complex and NDH... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40409 | No alias | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g115900.4.1 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g022900.4.1 | LHCA5, Solyc07g022900 | component LHCa5 of LHC-I complex | 0.11 | OrthoFinder output from all 47 species | |
| Solyc10g006230.3.1 | LHCA2, Solyc10g006230 | component LHCa2 of LHC-I complex | 0.06 | OrthoFinder output from all 47 species | |
| Solyc12g009200.2.1 | LHCA2*1, LHCA6,... | component LHCa6 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g04945 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04946 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g08046 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g29531 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.15 | OrthoFinder output from all 47 species | |
| Tin_g04383 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10537 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004129_P001 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015945_P001 | LHCA5, Zm00001e015945 | component LHCa5 of LHC-I complex | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e022453_P001 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e035349_P002 | LHCA2, Zm00001e035349 | component LHCa2 of LHC-I complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 52 | 120 |
| No external refs found! |