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  5. Smo402173

Smo402173


Description : Cell wall.pectin.homogalacturonan.synthesis.CGR-type methyltransferase


Gene families : OG0003308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo402173

Target Alias Description ECC score Gene Family Method Actions
Aob_g01313 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36285 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11074 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25056 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23120 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11903 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009285001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.03 OrthoFinder output from all 47 species
Gb_13505 No alias methyltransferase (CGR) 0.03 OrthoFinder output from all 47 species
Len_g46579 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02740 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30091 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g092000.3.1 Solyc02g092000 methyltransferase (CGR) 0.04 OrthoFinder output from all 47 species
Spa_g05912 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29968 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03175 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 144 223
No external refs found!