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  5. Smo402040

Smo402040


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo402040
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00110710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00122p00127250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G13300 HRS1 myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT2G03500 No alias Homeodomain-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G25790 No alias myb-like transcription factor family protein 0.05 OrthoFinder output from all 47 species
AT4G37180 No alias Homeodomain-like superfamily protein 0.06 OrthoFinder output from all 47 species
Aev_g37049 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g15773 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g21951 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g27276 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G045700.1 Ceric.21G045700 GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03915 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01015462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
Gb_34639 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g24770 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g03168 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_541749g0010 No alias G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
MA_58982g0010 ATCAD9, CAD9 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
Msp_g25323 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025023 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g29341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37435 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g55258 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g11367 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 230 281
No external refs found!