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  5. Smo28941

Smo28941


Description : Transcription factor GTE10 OS=Arabidopsis thaliana


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo28941

Target Alias Description ECC score Gene Family Method Actions
AT1G17790 No alias DNA-binding bromodomain-containing protein 0.03 OrthoFinder output from all 47 species
AT1G73150 GTE3 global transcription factor group E3 0.03 OrthoFinder output from all 47 species
AT5G10550 GTE2 global transcription factor group E2 0.03 OrthoFinder output from all 47 species
AT5G14270 BET9, ATBET9 bromodomain and extraterminal domain protein 9 0.03 OrthoFinder output from all 47 species
Aev_g18513 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024872 GTE6 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Cba_g12426 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Ceric.01G079700.1 GTE8, Ceric.01G079700 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G095200.1 GTE3, Ceric.14G095200 transcriptional co-activator *(BET/GTE) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01020670001 GTE4 Transcription factor GTE4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01038522001 GTE7 Transcription factor GTE7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Pir_g00429 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.05 OrthoFinder output from all 47 species
Pir_g19514 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Pir_g29495 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g20990 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g38970 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 15 83
No external refs found!