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  5. Smo270393

Smo270393


Description : Glutelin type-D 1 OS=Oryza sativa subsp. japonica


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo270393

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0007.g011190 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011191 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011215 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038308 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0104.g044758 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01028337001 CRU1, CRA1, ATCRA1 11S globulin subunit beta OS=Cucurbita maxima 0.04 OrthoFinder output from all 47 species
GSVIVT01028338001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
GSVIVT01028341001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
MA_3821g0010 No alias 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.03 OrthoFinder output from all 47 species
Msp_g20774 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Msp_g44561 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Ore_g43215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43845 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g25554 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g28194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g005580.2.1 CRU1, CRA1,... no description available(sp|a0a1l6k371|jugn4_jugni : 439.0) 0.03 OrthoFinder output from all 47 species
Solyc09g025210.3.1 CRU1, CRA1,... no description available(sp|q2tpw5|jugr4_jugre : 424.0) 0.03 OrthoFinder output from all 47 species
Solyc09g072560.4.1 CRU1, CRA1,... 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.03 OrthoFinder output from all 47 species
Solyc09g090150.4.1 CRU2, CRB, Solyc09g090150 no description available(sp|a0a1l6k371|jugn4_jugni : 418.0) 0.03 OrthoFinder output from all 47 species
Spa_g43375 No alias Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49551 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e038826_P001 Zm00001e038826 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 50 157
No external refs found!