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  5. Smo270259

Smo270259


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL15 component


Gene families : OG0002002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo270259
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00023340 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 OrthoFinder output from all 47 species
AT4G16720 No alias Ribosomal protein L23/L15e family protein 0.09 OrthoFinder output from all 47 species
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.19 OrthoFinder output from all 47 species
Adi_g011907 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g09138 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g00218 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.14 OrthoFinder output from all 47 species
Aspi01Gene36533.t1 Aspi01Gene36533 component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0148.g053106 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Cba_g11182 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g11183 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.30G015200.1 Ceric.30G015200 component *(eL15) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Ceric.31G036200.1 Ceric.31G036200 component *(eL15) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000310.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder output from all 47 species
Cre02.g091100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dac_g12320 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Dcu_g06645 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g36045 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder output from all 47 species
GSVIVT01014039001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder output from all 47 species
GSVIVT01018183001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Gb_32917 No alias component RPL15 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Gb_36986 No alias component RPL15 of LSU proteome component 0.09 OrthoFinder output from all 47 species
LOC_Os03g40180.1 LOC_Os03g40180 component RPL15 of LSU proteome component 0.2 OrthoFinder output from all 47 species
LOC_Os05g19370.1 LOC_Os05g19370 component RPL15 of LSU proteome component 0.22 OrthoFinder output from all 47 species
Len_g04559 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Len_g06859 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g00902 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g29958 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
MA_29804g0010 No alias component RPL15 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.18 OrthoFinder output from all 47 species
Msp_g17670 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Nbi_g01701 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Ore_g41630 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g30101 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c17_22180V3.1 Pp3c17_22180 Ribosomal protein L23/L15e family protein 0.03 OrthoFinder output from all 47 species
Ppi_g57425 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016249 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g13183 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g13184 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g14846 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g36073 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g36074 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g42941 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc04g008460.4.1 Solyc04g008460 component RPL15 of LSU proteome component 0.14 OrthoFinder output from all 47 species
Solyc06g060400.3.1 Solyc06g060400 component RPL15 of LSU proteome component 0.21 OrthoFinder output from all 47 species
Solyc06g064630.3.1 Solyc06g064630 component RPL15 of LSU proteome component 0.2 OrthoFinder output from all 47 species
Spa_g26060 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g26061 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Spa_g39098 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Spa_g55931 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Tin_g30457 No alias component *(eL15) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Zm00001e010380_P001 Zm00001e010380 component RPL15 of LSU proteome component 0.17 OrthoFinder output from all 47 species
Zm00001e032897_P001 Zm00001e032897 component RPL15 of LSU proteome component 0.18 OrthoFinder output from all 47 species
Zm00001e034995_P001 Zm00001e034995 component RPL15 of LSU proteome component 0.17 OrthoFinder output from all 47 species
Zm00001e034996_P001 Zm00001e034996 component RPL15 of LSU proteome component 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!