- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : BGAL8
Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase
Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00246870 | BGAL3,... | Cell wall.pectin.rhamnogalacturonan I.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00109160 | BGAL8,... | Cell wall.pectin.rhamnogalacturonan I.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00117p00063030 | BGAL9,... | Cell wall.pectin.rhamnogalacturonan I.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00138p00054750 | BGAL13,... | Cell wall.pectin.rhamnogalacturonan I.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18180 | BGAL8 | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g31090 | BGAL8 | EC_3.2 glycosylase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g11292 | BGAL9 | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05067 | BGAL9 | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005849001 | BGAL8 | Beta-galactosidase 6 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g39830.1 | BGAL1, LOC_Os01g39830 | beta-galactosidase (BGAL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g37560.1 | BGAL1, LOC_Os06g37560 | beta-galactosidase (BGAL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g42310.1 | BGAL15, LOC_Os06g42310 | beta-galactosidase (BGAL) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10704 | BGAL8 | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03344 | BGAL9 | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19244 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g018500.3.1 | BGAL16, Solyc11g018500 | beta-galactosidase (BGAL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010258_P001 | BGAL11, Zm00001e010258 | beta-galactosidase (BGAL) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031330 | Gly_Hdrlase_35_cat | 31 | 335 |
| No external refs found! |