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Aliases : PBC1
Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-3 component
Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo266913 | |
| Cluster | HCCA: Cluster_42 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G21720 | PBC1 | proteasome beta subunit C1 | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g00417 | PBC1 | beta-type-3 component *(PBC) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00265 | PBC1 | beta-type-3 component *(PBC) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011490 | PBC1 | beta-type-3 component *(PBC) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g267500 | PBC1 | Protein degradation.26S proteasome.20S core... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35364 | PBC1 | beta-type-3 component *(PBC) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03144 | PBC1 | beta-type-3 component *(PBC) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008836001 | PBC1 | Protein degradation.26S proteasome.20S core... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g08520.1 | PBC1, LOC_Os02g08520 | component beta type-3 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g43570.1 | PBC1, LOC_Os06g43570 | component beta type-3 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g15370.1 | PBC1 | component beta type-3 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g51262 | No alias | beta-type-3 component *(PBC) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009410.3.1 | PBC1, Solyc04g009410 | component beta type-3 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037487_P001 | PBC1, Zm00001e037487 | component beta type-3 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001353 | Proteasome_sua/b | 6 | 189 |
| No external refs found! |