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  5. Smo266789

Smo266789 (VPS2.3)


Aliases : VPS2.3

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component


Gene families : OG0003140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo266789

Target Alias Description ECC score Gene Family Method Actions
Als_g11633 VPS2.3 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene71707.t1 VPS2.3, Aspi01Gene71707 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Dcu_g06794 VPS2.3 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01037973001 VPS2.2 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.08 OrthoFinder output from all 47 species
LOC_Os03g43860.1 VPS2.2, LOC_Os03g43860 component VPS2/CHMP2 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Lfl_g38407 VPS2.3 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0304.g027216 VPS2.3 not classified & original description: CDS=1-639 0.01 OrthoFinder output from all 47 species
Sam_g30316 No alias component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 19 186
No external refs found!