LOC_Os02g53230.1


Description : component SPT5 of SPT4/5 transcription elongation factor complex


Gene families : OG_01_0001535 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001535_tree ,
OG_02_0002332 (LandPlants) Phylogenetic Tree(s): OG_02_0002332_tree ,
OG_03_0003310 (SeedPlants) Phylogenetic Tree(s): OG_03_0003310_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g53230.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00250180 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
AT2G34210 No alias Transcription elongation factor Spt5 0.02 Archaeplastida
AMTR_s00002p00250180 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 LandPlants
AMTR_s00002p00250180 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005100 NGN-domain 183 264
IPR022581 Spt5_N 89 177
IPR005824 KOW 471 498
No external refs found!