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  5. Smo233006

Smo233006 (FIM5, FIM2)


Aliases : FIM5, FIM2

Description : Cytoskeleton.microfilament network.actin polymerisation.fimbrin actin-crosslinking factor


Gene families : OG0001639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo233006
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0013.g013286 FIM1, ATFIM1 fimbrin actin-crosslinking factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G044200.1 FIM5, FIM2,... fimbrin actin-crosslinking factor & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000881.32 No alias Cytoskeleton.microfilament network.actin... 0.01 OrthoFinder output from all 47 species
Dcu_g05634 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g02922 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037750001 FIM5, FIM2 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
LOC_Os01g33080.1 LOC_Os01g33080 fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g37580.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Pir_g03093 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14587 No alias fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015665_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Zm00001e023425_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 514 617
No external refs found!