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  5. Smo230337

Smo230337


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP hydroxyproline O-galactosyltransferase


Gene families : OG0000727 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo230337
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene63669.t2 GALT1, Aspi01Gene63669 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0114.g046091 GALT1 not classified & original description: CDS=565-2319 0.02 OrthoFinder output from all 47 species
Ehy_g05968 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001079 Galectin_CRD 2 178
No external refs found!