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  5. Smo230231

Smo230231 (IRT3, ATIRT3)


Aliases : IRT3, ATIRT3

Description : Solute transport.carrier-mediated transport.ZIP family.metal cation transporter (ZIP-type)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo230231
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00183790 ZIP1,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
Aev_g18733 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06465 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48953.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48954.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0694.g082561 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0974.g094129 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g00948 ZIP10 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g46470.1 ZIP10, LOC_Os03g46470 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Mp4g19340.1 IRT3, ATIRT3 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 19 355
No external refs found!