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  5. LOC_Os02g52800.1

LOC_Os02g52800.1


Description : endo-beta-1,4-mannanase


Gene families : OG_01_0000315 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000315_tree ,
OG_02_0000179 (LandPlants) Phylogenetic Tree(s): OG_02_0000179_tree ,
OG_03_0001045 (SeedPlants) Phylogenetic Tree(s): OG_03_0001045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g52800.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT5G66460 AtMAN7, MAN7 Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
GSVIVT01037216001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
AT5G66460 AtMAN7, MAN7 Glycosyl hydrolase superfamily protein 0.02 LandPlants
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 LandPlants
AT5G66460 AtMAN7, MAN7 Glycosyl hydrolase superfamily protein 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 56 342
No external refs found!