Aliases : RUXF
Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-F component
Gene families : OG0002787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002787_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00226370 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
AT2G43810 | No alias | Small nuclear ribonucleoprotein family protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G59810 | No alias | Small nuclear ribonucleoprotein family protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G30220 | RUXF | small nuclear ribonucleoprotein F | 0.09 | OrthoFinder output from all 47 species | |
Adi_g129920 | No alias | component *(LSm6) of U6-associated LSm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.27G002400.1 | RUXF, Ceric.27G002400 | component *(Sm-F) of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.36G038500.1 | RUXF, Ceric.36G038500 | component *(Sm-F) of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001355.5 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g151750 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Cre05.g241300 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01003994001 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g08090.1 | LOC_Os02g08090 | component Sm-F of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g30624.2 | LOC_Os02g30624 | component LSm6 of U6-associated LSm accessory... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g31950.1 | LOC_Os04g31950 | component LSm6 of U6-associated LSm accessory... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os11g43620.1 | LOC_Os11g43620 | component Sm-F of U1/U2/U4/U5-associated Sm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Mp6g01610.1 | No alias | component Sm-F of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g27535 | RUXF | component *(Sm-F) of U1/U2/U4/U5-associated Sm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c12_17630V3.1 | RUXF, Pp3c12_17630 | small nuclear ribonucleoprotein F | 0.01 | OrthoFinder output from all 47 species | |
Solyc10g078450.2.1 | Solyc10g078450 | component LSm6 of U6-associated LSm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025108_P001 | RUXF, Zm00001e025108 | component Sm-F of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 11 | 73 |
No external refs found! |