Smo227421

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL20 component

Gene families : OG0003165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003165_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo227421
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
Ala_g22480	No alias	component *(bL20m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aop_g18418	No alias	component *(bL20m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Aspi01Gene16132.t1	Aspi01Gene16132	component *(bL20m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.23G069900.1	Ceric.23G069900	component *(bL20m) of large mitoribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Len_g05086	No alias	component *(bL20m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Mp1g27510.1	No alias	component mtRPL20 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Pir_g38990	No alias	component *(bL20m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ppi_g20970	No alias	component *(bL20m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018192	No alias	component *(bL20m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sam_g37873	No alias	component *(bL20m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Solyc02g069840.3.1	Solyc02g069840	component mtRPL20 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005813	Ribosomal_L20	3	98

External Links

No external refs found!