LOC_Os02g52510.1


Description : chromatin remodeling factor (Rad54)


Gene families : OG_01_0002451 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002451_tree ,
OG_02_0003563 (LandPlants) Phylogenetic Tree(s): OG_02_0003563_tree ,
OG_03_0005973 (SeedPlants) Phylogenetic Tree(s): OG_03_0005973_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g52510.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.39 No alias Chromatin organisation.chromatin remodeling... 0.06 Archaeplastida
Cre10.g430950 No alias Chromatin organisation.chromatin remodeling... 0.04 Archaeplastida
Gb_22242 No alias Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Gb_22245 No alias DNA repair and recombination protein RAD54 OS=Oryza... 0.09 Archaeplastida
Mp6g06120.1 No alias chromatin remodeling factor (Rad54) 0.08 Archaeplastida
Pp3c16_6690V3.1 No alias homolog of RAD54 0.03 Archaeplastida
Pp3c5_12730V3.1 No alias homolog of RAD54 0.02 Archaeplastida
Pp3c8_17910V3.1 No alias homolog of RAD54 0.01 Archaeplastida
Solyc04g056410.3.1 No alias chromatin remodeling factor (Rad54) 0.11 Archaeplastida
Zm00001e015936_P001 No alias chromatin remodeling factor (Rad54) 0.04 Archaeplastida
Gb_22245 No alias DNA repair and recombination protein RAD54 OS=Oryza... 0.07 LandPlants
Mp6g06120.1 No alias chromatin remodeling factor (Rad54) 0.08 LandPlants
Pp3c5_12730V3.1 No alias homolog of RAD54 0.01 LandPlants
Pp3c8_17910V3.1 No alias homolog of RAD54 0.01 LandPlants
Solyc04g056410.3.1 No alias chromatin remodeling factor (Rad54) 0.08 LandPlants
Zm00001e015936_P001 No alias chromatin remodeling factor (Rad54) 0.04 LandPlants
Solyc04g056410.3.1 No alias chromatin remodeling factor (Rad54) 0.08 SeedPlants
Zm00001e015936_P001 No alias chromatin remodeling factor (Rad54) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 595 703
IPR000330 SNF2_dom 258 544
No external refs found!