1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo185331

Smo185331 (ATUBC1, UBC1)


Aliases : ATUBC1, UBC1

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein


Gene families : OG0003855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo185331

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0005.g009122 ATUBC1, UBC1 not classified & original description: CDS=204-665 0.02 OrthoFinder output from all 47 species
Ceric.15G032400.1 ATUBC1, UBC1,... E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g04865 ATUBC2, UBC2 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g54420 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 145
No external refs found!