Smo183457 (AtATG18a)


Aliases : AtATG18a

Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo183457

Target Alias Description ECC score Gene Family Method Actions
Aop_g05929 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Cba_g02515 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Dcu_g06297 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ore_g18612 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Pir_g41164 ATG18D, ATATG18D not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 214 252
No external refs found!