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  5. Smo179747

Smo179747


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component


Gene families : OG0001435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo179747

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00066640 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT1G02780 emb2386 Ribosomal protein L19e family protein 0.15 OrthoFinder output from all 47 species
Ala_g23889 emb2386 component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g28989 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Aob_g06313 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g03394 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aop_g14682 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aspi01Gene61028.t1 Aspi01Gene61028 component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009570 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Azfi_s0627.g079994 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g07141 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.07G087100.1 Ceric.07G087100 component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.17G056200.1 Ceric.17G056200 component *(eL19) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.1 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 OrthoFinder output from all 47 species
Cre02.g075700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g04507 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Dcu_g35194 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Dcu_g41239 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dde_g48535 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g08158 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ehy_g08169 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
GSVIVT01035096001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder output from all 47 species
Gb_23171 emb2386 component RPL19 of LSU proteome component 0.1 OrthoFinder output from all 47 species
Gb_23172 No alias component RPL19 of LSU proteome component 0.08 OrthoFinder output from all 47 species
LOC_Os03g21940.1 emb2386, LOC_Os03g21940 component RPL19 of LSU proteome component 0.11 OrthoFinder output from all 47 species
LOC_Os03g38260.1 LOC_Os03g38260 component RPL19 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Len_g04088 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Len_g07146 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g06894 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
MA_1839g0010 emb2386 component RPL19 of LSU proteome component 0.14 OrthoFinder output from all 47 species
MA_22977g0010 emb2386 component RPL19 of LSU proteome component 0.17 OrthoFinder output from all 47 species
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.16 OrthoFinder output from all 47 species
Msp_g06900 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Msp_g18967 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g05153 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c15_5130V3.1 Pp3c15_5130 Ribosomal protein L19e family protein 0.05 OrthoFinder output from all 47 species
Pp3c16_410V3.1 Pp3c16_410 Ribosomal protein L19e family protein 0.1 OrthoFinder output from all 47 species
Pp3c21_11230V3.1 Pp3c21_11230 Ribosomal protein L19e family protein 0.12 OrthoFinder output from all 47 species
Pp3c22_9980V3.1 Pp3c22_9980 Ribosomal protein L19e family protein 0.03 OrthoFinder output from all 47 species
Pp3c9_14720V3.1 Pp3c9_14720 Ribosomal protein L19e family protein 0.08 OrthoFinder output from all 47 species
Ppi_g01823 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g28399 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005282 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g19648 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g25834 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g38378 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Solyc06g009210.4.1 emb2386, Solyc06g009210 component RPL19 of LSU proteome component 0.08 OrthoFinder output from all 47 species
Solyc09g075430.3.1 Solyc09g075430 component RPL19 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Spa_g11535 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Spa_g11536 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Spa_g11537 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g40826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03158 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Zm00001e013683_P001 emb2386, Zm00001e013683 component RPL19 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e020524_P001 emb2386, Zm00001e020524 component RPL19 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e025202_P001 Zm00001e025202 component RPL19 of LSU proteome component 0.12 OrthoFinder output from all 47 species
Zm00001e036280_P001 Zm00001e036280 component RPL19 of LSU proteome component 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 144
No external refs found!