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  5. Smo176603

Smo176603


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo176603

Target Alias Description ECC score Gene Family Method Actions
Ala_g24303 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11657 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23279 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g25389 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G013500.1 Ceric.10G013500 histone *(H3) & original description: pacid=50612923... 0.05 OrthoFinder output from all 47 species
Ceric.19G072200.1 Ceric.19G072200 histone *(H3) & original description: pacid=50576221... 0.06 OrthoFinder output from all 47 species
Ceric.1Z177000.1 Ceric.1Z177000 histone *(H3) & original description: pacid=50628432... 0.06 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.07 OrthoFinder output from all 47 species
Ceric.27G029300.1 Ceric.27G029300 histone *(H3) & original description: pacid=50605405... 0.06 OrthoFinder output from all 47 species
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.08 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.06 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.07 OrthoFinder output from all 47 species
GSVIVT01027073001 HTR12, CENH3 Cell cycle.mitosis and meiosis.chromosome... 0.04 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Gb_19428 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Gb_19430 No alias histone (H3) 0.06 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.07 OrthoFinder output from all 47 species
Gb_40804 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os03g27310.2 LOC_Os03g27310 histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.03 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_113838g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_17527g0010 No alias histone (H3) 0.08 OrthoFinder output from all 47 species
MA_210354g0010 No alias histone (H3) 0.06 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.06 OrthoFinder output from all 47 species
MA_561217g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Ore_g06291 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_13230V3.1 Pp3c24_13230 Histone superfamily protein 0.04 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc01g086800.4.1 Solyc01g086800 Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 122.0) 0.05 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.05 OrthoFinder output from all 47 species
Solyc11g010230.2.1 Solyc11g010230 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc12g056540.1.1 Solyc12g056540 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g18210 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46951 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52464 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008155_P001 Zm00001e008155 histone (H3) 0.04 OrthoFinder output from all 47 species
Zm00001e014760_P001 Zm00001e014760 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e029901_P001 Zm00001e029901 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e036599_P001 Zm00001e036599 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e040856_P001 Zm00001e040856 histone (H3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!