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  5. Smo173775

Smo173775


Description : DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana


Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo173775

Target Alias Description ECC score Gene Family Method Actions
AT1G58060 No alias RNA helicase family protein 0.03 OrthoFinder output from all 47 species
AT2G01130 No alias DEA(D/H)-box RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Adi_g021909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17058.t1 Aspi01Gene17058 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023271001 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os04g35260.1 LOC_Os04g35260 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_177779g0010 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_291146g0010 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g43492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_19726V3.1 Pp3c17_19726 RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g09359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006970.4.1 Solyc01g006970 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g007510.4.1 Solyc04g007510 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... 0.02 OrthoFinder output from all 47 species
Tin_g02164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004608_P001 Zm00001e004608 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 390 511
No external refs found!