1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo173154

Smo173154 (CASP, AtCASP)


Aliases : CASP, AtCASP

Description : Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.CASP-type golgin


Gene families : OG0004640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004640_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo173154
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Adi_g022485 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Aev_g01539 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Als_g01937 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.05 OrthoFinder output from all 47 species
Ceric.18G007100.1 CASP, AtCASP,... Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.15 CASP, AtCASP Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
Cre04.g223900 CASP, AtCASP No description available 0.01 OrthoFinder output from all 47 species
Dac_g09866 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Dcu_g12650 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008258001 CASP, AtCASP Vesicle trafficking.target membrane tethering.Golgi... 0.03 OrthoFinder output from all 47 species
Pnu_g06413 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Solyc06g069210.3.1 CASP, AtCASP,... golgin (CASP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0030173 obsolete integral component of Golgi membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012955 CASP_C 447 675
No external refs found!