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  5. Smo171192

Smo171192


Description : Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.CENH3 histone H3 variant


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo171192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
AT1G09200 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10400 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g08007 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30174 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34133 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03763 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19848 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01978.t1 Aspi01Gene01978 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58554.t1 Aspi01Gene58554 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.02 OrthoFinder output from all 47 species
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.02 OrthoFinder output from all 47 species
Len_g26206 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45428 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23375 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
MA_17527g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_210354g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37008 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_13230V3.1 Pp3c24_13230 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g11156 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.05 OrthoFinder output from all 47 species
Solyc11g010230.2.1 Solyc11g010230 histone (H3) 0.02 OrthoFinder output from all 47 species
Spa_g04339 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008155_P001 Zm00001e008155 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e014760_P001 Zm00001e014760 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e016861_P001 Zm00001e016861 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e019170_P001 Zm00001e019170 histone (H3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 15 119
No external refs found!