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  5. Smo170980

Smo170980 (EIF2 BETA, EMB1401)


Aliases : EIF2 BETA, EMB1401

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-beta component


Gene families : OG0002451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo170980

Target Alias Description ECC score Gene Family Method Actions
AT5G20920 EIF2 BETA, EMB1401 eukaryotic translation initiation factor 2 beta subunit 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035333 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.18 EIF2 BETA, EMB1401 Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Mp3g17920.1 EIF2 BETA, EMB1401 component eIF2-beta of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Tin_g43896 EIF2 BETA, EMB1401 component *(eIF2-beta) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Zm00001e001571_P003 EIF2 BETA,... component eIF2-beta of eIF2 Met-tRNA binding factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e010982_P001 EIF2 BETA,... component eIF2-beta of eIF2 Met-tRNA binding factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002735 Transl_init_fac_IF2/IF5_dom 142 251
No external refs found!