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  5. Smo168175

Smo168175 (AFB2)


Aliases : AFB2

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo168175
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00270130 AFB3,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT3G26810 AFB2 auxin signaling F-box 2 0.02 OrthoFinder output from all 47 species
AT5G49980 AFB5 auxin F-box protein 5 0.02 OrthoFinder output from all 47 species
Adi_g018200 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Adi_g053952 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04857 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ala_g07494 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Als_g24136 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04141.t1 AFB2, Aspi01Gene04141 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02651 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Cba_g07454 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ceric.05G036600.1 COI1, Ceric.05G036600 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Ceric.16G039600.1 AFB2, Ceric.16G039600 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Dcu_g10257 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dcu_g11664 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g02869 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08850.1 AFB5, LOC_Os03g08850 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Len_g15985 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g18913 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_78902g0010 AFB5 component TIR1/AFB of auxin receptor complex 0.03 OrthoFinder output from all 47 species
Mp2g26590.1 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Ore_g26263 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Pir_g01031 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Pnu_g20970 COI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24051 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Solyc04g074980.3.1 AFB5, Solyc04g074980 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Spa_g07433 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Zm00001e015908_P001 Zm00001e015908 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!