Smo168153 (CPN60B, LEN1)

Aliases : CPN60B, LEN1

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo168153
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00080200	CH-CPN60A,...	External stimuli response.temperature.Hsp...	0.05	OrthoFinder output from all 47 species
AMTR_s00062p00185880	CH-CPN60A,...	External stimuli response.temperature.Hsp...	0.06	OrthoFinder output from all 47 species
AMTR_s00106p00119930	CPN60B, LEN1,...	External stimuli response.temperature.Hsp...	0.05	OrthoFinder output from all 47 species
AT1G26230	No alias	TCP-1/cpn60 chaperonin family protein	0.04	OrthoFinder output from all 47 species
AT5G18820	EMB3007	TCP-1/cpn60 chaperonin family protein	0.03	OrthoFinder output from all 47 species
Adi_g008941	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g013083	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g013893	CH-CPN60A, CPN60A, SLP	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g114645	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g02236	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g07607	No alias	chaperone *(Hsp60) & original description: none	0.05	OrthoFinder output from all 47 species
Als_g26318	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g08982	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g31738	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0029.g024060	CPN60B, LEN1	chaperone *(Hsp60) & original description: CDS=155-2068	0.03	OrthoFinder output from all 47 species
Cba_g03270	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g03962	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g03991	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g13701	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.32G022500.1	CPN60B, LEN1,...	chaperone *(Hsp60) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.34G041900.1	CPN60B, LEN1,...	chaperone *(Hsp60) & original description:...	0.03	OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.28	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species
Cre04.g231222	CH-CPN60A, CPN60A, SLP	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Cre17.g741450	CPN60B, LEN1	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Dac_g03806	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g15356	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g19819	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g03882	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g08062	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01010149001	No alias	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
GSVIVT01012098001	EMB3007	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
GSVIVT01025490001	No alias	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
GSVIVT01031526001	CH-CPN60A, CPN60A, SLP	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
LOC_Os06g02380.2	CPN60B, LEN1,...	subunit beta of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
LOC_Os09g38980.1	EMB3007, LOC_Os09g38980	subunit alpha of Cpn60 chaperonin complex. component...	0.04	OrthoFinder output from all 47 species
LOC_Os12g17910.1	CH-CPN60A,...	subunit alpha of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Len_g13340	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g12872	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g28437	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
MA_10436772g0010	CH-CPN60A, CPN60A, SLP	chaperone (Hsp60)	0.03	OrthoFinder output from all 47 species
MA_587689g0010	CH-CPN60A, CPN60A, SLP	RuBisCO large subunit-binding protein subunit alpha...	0.03	OrthoFinder output from all 47 species
MA_97627g0010	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.03	OrthoFinder output from all 47 species
Mp1g21640.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Msp_g08431	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g11382	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g03062	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g15384	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c16_4660V3.1	CPN60B, LEN1, Pp3c16_4660	chaperonin 60 beta	0.01	OrthoFinder output from all 47 species
Pp3c24_12180V3.1	CH-CPN60A,...	chaperonin-60alpha	0.02	OrthoFinder output from all 47 species
Ppi_g14667	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.07	OrthoFinder output from all 47 species
Ppi_g32241	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g40159	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g56884	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15739	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g39492	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g028810.3.1	Solyc01g028810	subunit beta of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species
Solyc02g068730.3.1	EMB3007, Solyc02g068730	subunit alpha of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Solyc03g120850.4.1	CPN60B, LEN1,...	subunit beta of Cpn60 chaperonin complex. component...	0.05	OrthoFinder output from all 47 species
Solyc05g010240.4.1	Solyc05g010240	subunit beta of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Spa_g09931	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001025_P002	Zm00001e001025	subunit beta of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Zm00001e006438_P001	CH-CPN60A,...	subunit alpha of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Zm00001e029825_P001	CPN60B, LEN1,...	subunit beta of Cpn60 chaperonin complex. component...	0.04	OrthoFinder output from all 47 species
Zm00001e031536_P001	CH-CPN60A,...	subunit alpha of Cpn60 chaperonin complex. component...	0.04	OrthoFinder output from all 47 species
Zm00001e037002_P001	CH-CPN60A,...	Chaperonin 60 subunit alpha 1, chloroplastic...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0032977	membrane insertase activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140597	protein carrier chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	24	527

External Links

No external refs found!

Smo168153 (CPN60B, LEN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation