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  5. Smo167991

Smo167991 (VPS35B)


Aliases : VPS35B

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component


Gene families : OG0003496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo167991

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00172760 VPS35B,... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
AT2G17790 ZIP3, VPS35A VPS35 homolog A 0.03 OrthoFinder output from all 47 species
AT3G51310 VPS35C VPS35 homolog C 0.03 OrthoFinder output from all 47 species
Ceric.32G026000.1 VPS35B, Ceric.32G026000 component *(VPS35) of Retromer protein recycling complex... 0.04 OrthoFinder output from all 47 species
Dcu_g44008 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01009948001 VPS35B Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01018728001 VPS35B Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58700.1 VPS35B, LOC_Os03g58700 component VPS35 of Retromer protein recycling complex 0.03 OrthoFinder output from all 47 species
Ppi_g04632 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.02 OrthoFinder output from all 47 species
Solyc03g033400.4.1 ZIP3, VPS35A,... component VPS35 of Retromer protein recycling complex 0.05 OrthoFinder output from all 47 species
Solyc12g089340.2.1 VPS35B, Solyc12g089340 component VPS35 of Retromer protein recycling complex 0.02 OrthoFinder output from all 47 species
Tin_g02135 VPS35B component *(VPS35) of Retromer protein recycling complex... 0.02 OrthoFinder output from all 47 species
Zm00001e006031_P002 VPS35B, Zm00001e006031 component VPS35 of Retromer protein recycling complex 0.04 OrthoFinder output from all 47 species
Zm00001e011849_P003 VPS35B, Zm00001e011849 component VPS35 of Retromer protein recycling complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0042147 retrograde transport, endosome to Golgi IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR005378 Vps35 16 746
No external refs found!