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  5. Smo167497

Smo167497


Description : Chromatin organisation.histones.H4-type histone


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo167497
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G07820 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G28740 HIS4 histone H4 0.02 OrthoFinder output from all 47 species
AT3G45930 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G46320 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G53730 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G59690 No alias Histone superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G59970 No alias Histone superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g006378 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g128464 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08050 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26332.t1 Aspi01Gene26332 histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0191.g057030 No alias histone *(H4) & original description: CDS=1-312 0.02 OrthoFinder output from all 47 species
Cba_g55772 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76920 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.11G079500.1 Ceric.11G079500 histone *(H4) & original description: pacid=50595239... 0.01 OrthoFinder output from all 47 species
Ceric.12G065700.1 Ceric.12G065700 histone *(H4) & original description: pacid=50601214... 0.02 OrthoFinder output from all 47 species
Ceric.12G080900.1 Ceric.12G080900 histone *(H4) & original description: pacid=50601464... 0.02 OrthoFinder output from all 47 species
Ceric.14G089900.1 Ceric.14G089900 histone *(H4) & original description: pacid=50633501... 0.02 OrthoFinder output from all 47 species
Ceric.28G045100.1 Ceric.28G045100 histone *(H4) & original description: pacid=50570632... 0.01 OrthoFinder output from all 47 species
Ceric.29G055000.1 Ceric.29G055000 histone *(H4) & original description: pacid=50624348... 0.02 OrthoFinder output from all 47 species
Ceric.38G017000.1 Ceric.38G017000 histone *(H4) & original description: pacid=50580621... 0.02 OrthoFinder output from all 47 species
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Dac_g11115 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016576001 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Gb_10373 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Gb_10374 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Gb_15458 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Gb_21914 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Gb_21918 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os01g61920.1 LOC_Os01g61920 histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45940.1 LOC_Os02g45940 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os03g02780.1 LOC_Os03g02780 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os04g49420.1 LOC_Os04g49420 histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os05g38740.1 LOC_Os05g38740 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39050.1 LOC_Os05g39050 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os07g36500.1 LOC_Os07g36500 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os09g26340.1 LOC_Os09g26340 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os09g38020.1 LOC_Os09g38020 histone (H4) 0.02 OrthoFinder output from all 47 species
MA_10428142g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_10433778g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_116904g0010 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
MA_234535g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_713159g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_74102g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_89764g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_97951g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Mp5g16840.1 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Mp5g22460.1 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Mp5g22470.1 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Pnu_g12308 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c14_26430V3.1 Pp3c14_26430 histone H4 0.01 OrthoFinder output from all 47 species
Pp3c15_5780V3.1 Pp3c15_5780 histone H4 0.02 OrthoFinder output from all 47 species
Pp3c4_22160V3.1 Pp3c4_22160 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c7_22150V3.1 Pp3c7_22150 histone H4 0.02 OrthoFinder output from all 47 species
Sam_g06107 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g011390.1.1 Solyc04g011390 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc05g054610.1.1 Solyc05g054610 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc06g005430.1.1 Solyc06g005430 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc06g075830.2.1 Solyc06g075830 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc06g075850.1.1 Solyc06g075850 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc06g075930.1.1 Solyc06g075930 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g075960.1.1 Solyc06g075960 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc11g072840.1.1 Solyc11g072840 histone (H4) 0.02 OrthoFinder output from all 47 species
Spa_g35494 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g42771 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007138_P001 Zm00001e007138 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e009859_P001 Zm00001e009859 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e016816_P001 Zm00001e016816 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e019368_P001 Zm00001e019368 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e027269_P001 Zm00001e027269 histone (H4) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!