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Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.epsilon subunit
Gene families : OG0004408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004408_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo166040 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G30630 | No alias | Coatomer epsilon subunit | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g014852 | No alias | subunit epsilon of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22069 | No alias | subunit epsilon of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19947 | No alias | subunit epsilon of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g21658 | No alias | subunit epsilon of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G089800.1 | Ceric.10G089800 | subunit epsilon of coat protein complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000388.62 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11510 | No alias | subunit epsilon of coat protein complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g52270.1 | LOC_Os04g52270 | subunit epsilon of coat protein complex | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g13561 | No alias | subunit epsilon of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_3259g0010 | No alias | subunit epsilon of coat protein complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g28220.1 | No alias | subunit epsilon of coat protein complex | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g00461 | No alias | subunit epsilon of coat protein complex & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| BP | GO:0006465 | signal peptide processing | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |