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  5. Smo165371

Smo165371


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL27a component


Gene families : OG0001601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo165371
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00158350 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
AMTR_s00130p00058120 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
AT1G23290 RPL27AB, RPL27A Ribosomal protein L18e/L15 superfamily protein 0.13 OrthoFinder output from all 47 species
AT1G70600 No alias Ribosomal protein L18e/L15 superfamily protein 0.11 OrthoFinder output from all 47 species
Adi_g102572 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g05509 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ala_g19375 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g06147 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Aop_g21837 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0167.g054511 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0617.g079530 RPL27AB, RPL27A component *(uL15) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ceric.29G012700.1 Ceric.29G012700 component *(uL15) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cre02.g115200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder output from all 47 species
Dac_g01203 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
GSVIVT01004075001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01007667001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Gb_05659 No alias component RPL27a of LSU proteome component 0.11 OrthoFinder output from all 47 species
Gb_26884 No alias component RPL27a of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os02g07890.2 LOC_Os02g07890 component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os03g29460.1 LOC_Os03g29460 component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os07g42170.1 RPL27AB, RPL27A,... component RPL27a of LSU proteome component 0.09 OrthoFinder output from all 47 species
MA_102140g0020 No alias component RPL27a of LSU proteome component 0.06 OrthoFinder output from all 47 species
MA_10436259g0020 No alias component RPL27a of LSU proteome component 0.06 OrthoFinder output from all 47 species
Mp1g15440.1 No alias component RPL27a of LSU proteome component 0.1 OrthoFinder output from all 47 species
Mp5g00120.1 No alias component RPL27a of LSU proteome component 0.07 OrthoFinder output from all 47 species
Msp_g01324 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Nbi_g27800 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Nbi_g40282 RPL27AB, RPL27A component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c16_22430V3.1 Pp3c16_22430 Ribosomal protein L18e/L15 superfamily protein 0.08 OrthoFinder output from all 47 species
Pp3c20_18830V3.1 Pp3c20_18830 Ribosomal protein L18e/L15 superfamily protein 0.08 OrthoFinder output from all 47 species
Pp3c25_13260V3.1 Pp3c25_13260 Ribosomal protein L18e/L15 superfamily protein 0.06 OrthoFinder output from all 47 species
Pp3c6_3470V3.1 Pp3c6_3470 Ribosomal protein L18e/L15 superfamily protein 0.09 OrthoFinder output from all 47 species
Pp3c8_5770V3.1 Pp3c8_5770 Ribosomal protein L18e/L15 superfamily protein 0.08 OrthoFinder output from all 47 species
Ppi_g46776 RPL27AB, RPL27A component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022228 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g14847 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g25032 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Sam_g25695 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g47290 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Sam_g48454 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Solyc03g112360.1.1 Solyc03g112360 component RPL27a of LSU proteome component 0.09 OrthoFinder output from all 47 species
Solyc06g071720.1.1 Solyc06g071720 component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g03362 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g17344 RPL27AB, RPL27A component *(uL15) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Tin_g02964 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Zm00001e010753_P001 Zm00001e010753 component RPL27a of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e035537_P001 Zm00001e035537 component RPL27a of LSU proteome component 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 28 145
No external refs found!