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  5. Smo165130

Smo165130 (LACS6, ATLACS6)


Aliases : LACS6, ATLACS6

Description : Lipid metabolism.lipid degradation.fatty acid degradation.peroxisomal long-chain acyl-CoA synthetase


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo165130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00159p00012160 LACS4,... Enzyme classification.EC_6 ligases.EC_6.2 ligase forming... 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043584 ATLACS7, LACS7 not classified & original description: CDS=91-459 0.03 OrthoFinder output from all 47 species
Ceric.1Z191000.1 LACS4, Ceric.1Z191000 not classified & original description: pacid=50613630... 0.02 OrthoFinder output from all 47 species
Ceric.33G045300.1 LACS6, ATLACS6,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020807.6 ATLACS7, LACS7 Long chain acyl-CoA synthetase 7, peroxisomal... 0.02 OrthoFinder output from all 47 species
Cre12.g507400 LACS6, ATLACS6 Lipid metabolism.lipid degradation.fatty acid... 0.03 OrthoFinder output from all 47 species
LOC_Os12g04990.1 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.04 OrthoFinder output from all 47 species
MA_498995g0010 LACS6, ATLACS6 Long chain acyl-CoA synthetase 6, peroxisomal... 0.02 OrthoFinder output from all 47 species
Mp8g16310.1 LACS6, ATLACS6 peroxisomal long-chain acyl-CoA synthetase 0.02 OrthoFinder output from all 47 species
Solyc08g082280.4.1 LACS4, Solyc08g082280 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g14623 LACS6, ATLACS6 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e039185_P005 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 107 548
No external refs found!