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  5. LOC_Os02g51070.1

LOC_Os02g51070.1


Description : starch synthase (SSII)


Gene families : OG_01_0000161 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000161_tree ,
OG_02_0002981 (LandPlants) Phylogenetic Tree(s): OG_02_0002981_tree ,
OG_03_0003717 (SeedPlants) Phylogenetic Tree(s): OG_03_0003717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g51070.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214840 evm_27.TU.AmTr_v1... Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 Archaeplastida
AMTR_s00100p00051890 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT1G32900 No alias UDP-Glycosyltransferase superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00020746.8 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 Archaeplastida
Cre04.g215150 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.01 Archaeplastida
Cre16.g665800 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
GSVIVT01027437001 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Gb_26227 No alias granule-bound starch (amylose) synthase 0.05 Archaeplastida
Mp1g14910.1 No alias starch synthase (SSIV) 0.03 Archaeplastida
Mp2g08030.1 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 Archaeplastida
Pp3c18_20850V3.1 No alias UDP-Glycosyltransferase superfamily protein 0.06 Archaeplastida
Pp3c7_22420V3.1 No alias starch synthase 4 0.02 Archaeplastida
Smo154776 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
Zm00001e023903_P001 No alias starch synthase (SSII) 0.01 Archaeplastida
Zm00001e023903_P001 No alias starch synthase (SSII) 0.01 LandPlants
Zm00001e023903_P001 No alias starch synthase (SSII) 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 204 446
IPR001296 Glyco_trans_1 505 650
No external refs found!