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  5. Smo160351

Smo160351 (SRA1, KLK, PIR,...)


Aliases : SRA1, KLK, PIR, ATSRA1, PIRP, PIR121

Description : Cytoskeleton.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.PIROGI component


Gene families : OG0005627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo160351
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT5G18410 SRA1, KLK, PIR,... transcription activators 0.02 OrthoFinder output from all 47 species
Aev_g08861 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.02 OrthoFinder output from all 47 species
Ala_g12486 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.02 OrthoFinder output from all 47 species
Aob_g25754 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.03 OrthoFinder output from all 47 species
Gb_18362 SRA1, KLK, PIR,... Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 154.0) 0.02 OrthoFinder output from all 47 species
Gb_18366 SRA1, KLK, PIR,... Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 156.0) 0.02 OrthoFinder output from all 47 species
LOC_Os03g05020.1 SRA1, KLK, PIR,... component PIROGI of SCAR/WAVE ARP2/3-activating complex 0.02 OrthoFinder output from all 47 species
MA_10436695g0010 SRA1, KLK, PIR,... component PIROGI of SCAR/WAVE ARP2/3-activating complex 0.02 OrthoFinder output from all 47 species
MA_162014g0010 SRA1, KLK, PIR,... Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 168.0) 0.02 OrthoFinder output from all 47 species
MA_9839424g0010 SRA1, KLK, PIR,... Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 254.0) 0.02 OrthoFinder output from all 47 species
Ore_g15062 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.02 OrthoFinder output from all 47 species
Ppi_g03276 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.03 OrthoFinder output from all 47 species
Sam_g07914 No alias component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.02 OrthoFinder output from all 47 species
Solyc11g013280.1.1 SRA1, KLK, PIR,... component PIROGI of SCAR/WAVE ARP2/3-activating complex 0.02 OrthoFinder output from all 47 species
Tin_g02188 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activaTing... 0.02 OrthoFinder output from all 47 species
Zm00001e000353_P001 SRA1, KLK, PIR,... component PIROGI of SCAR/WAVE ARP2/3-activating complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR009828 CYRIA/CYRIB_Rac1-bd 52 290
No external refs found!