- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Snu13 component
Gene families : OG0002183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002183_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G12600 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G20160 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06081 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0280.g062289 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Cre06.g249250 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g13800.1 | LOC_Os03g13800 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.02 | OrthoFinder output from all 47 species | |
| MA_16906g0010 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.04 | OrthoFinder output from all 47 species | |
| MA_433779g0010 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c17_18010V3.1 | Pp3c17_18010 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08742 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g30682 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038611_P002 | Zm00001e038611 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006457 | protein folding | IEP | HCCA |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 21 | 110 |
| No external refs found! |