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  5. Smo154280

Smo154280 (OVA1)


Aliases : OVA1

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase


Gene families : OG0004238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo154280
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00101170 OVA1,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
AT3G55400 OVA1 methionyl-tRNA synthetase / methionine--tRNA ligase /... 0.05 OrthoFinder output from all 47 species
Aop_g12932 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55693.t1 Aspi01Gene55693 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G028400.1 OVA1, Ceric.28G028400 methionine-tRNA ligase & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000607.15 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.1 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Cre12.g487100 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Dac_g09156 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48825 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07108 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07779 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016575001 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 OrthoFinder output from all 47 species
Gb_24980 OVA1 Methionine--tRNA ligase, chloroplastic/mitochondrial... 0.04 OrthoFinder output from all 47 species
LOC_Os03g11120.1 OVA1, LOC_Os03g11120 methionine-tRNA ligase 0.08 OrthoFinder output from all 47 species
Lfl_g07353 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432167g0010 OVA1 methionine-tRNA ligase 0.02 OrthoFinder output from all 47 species
Mp2g16770.1 OVA1 methionine-tRNA ligase 0.06 OrthoFinder output from all 47 species
Msp_g13262 OVA1 methionine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11084 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25309 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05249 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13764 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016381 OVA1 methionine-tRNA ligase & original description: CDS=128-1948 0.07 OrthoFinder output from all 47 species
Solyc05g054600.3.1 OVA1, Solyc05g054600 methionine-tRNA ligase 0.07 OrthoFinder output from all 47 species
Spa_g39108 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000706_P004 OVA1, Zm00001e000706 methionine-tRNA ligase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 117 344
No external refs found!