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  5. Smo153081

Smo153081


Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor


Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo153081
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00115820 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.08 OrthoFinder output from all 47 species
Aop_g11193 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Cba_g07152 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G051100.1 Ceric.33G051100 translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01379 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os03g63410.1 LOC_Os03g63410 EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species
Lfl_g01476 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
MA_58335g0010 No alias EF-Tu translation elongation factor 0.04 OrthoFinder output from all 47 species
Ore_g05800 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Spa_g01140 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Spa_g46564 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Tin_g06040 No alias translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e006373_P001 Zm00001e006373 EF-Tu translation elongation factor 0.07 OrthoFinder output from all 47 species
Zm00001e011649_P001 Zm00001e011649 EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 8 201
No external refs found!