Smo151128

Description : Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SPCs3 component

Gene families : OG0003386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003386_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo151128
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AT3G05230	No alias	Signal peptidase subunit	0.03	OrthoFinder output from all 47 species
Aop_g25256	No alias	component *(SPCs3) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Azfi_s0265.g060953	No alias	component *(SPCs3) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Cba_g04906	No alias	component *(SPCs3) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Dcu_g07355	No alias	component *(SPCs3) of SPC endoplasmic signal peptidase...	0.05	OrthoFinder output from all 47 species
Dde_g25176	No alias	component *(SPCs3) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Gb_35804	No alias	component SPCs3 of SPC endoplasmic signal peptidase complex	0.03	OrthoFinder output from all 47 species
LOC_Os09g38370.1	LOC_Os09g38370	component SPCs3 of SPC endoplasmic signal peptidase complex	0.02	OrthoFinder output from all 47 species
Pp3c2_31480V3.1	Pp3c2_31480	Signal peptidase subunit	0.01	OrthoFinder output from all 47 species
Spa_g08034	No alias	component *(SPCs3) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Tin_g21481	No alias	component *(SPCs3) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Zm00001e010321_P001	Zm00001e010321	component SPCs3 of SPC endoplasmic signal peptidase complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006465	signal peptide processing	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016485	protein processing	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007653	SPC3	5	164

External Links

No external refs found!