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  5. Smo149863

Smo149863 (ELF8, VIP6)


Aliases : ELF8, VIP6

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP6/CTR9 component


Gene families : OG0004869 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004869_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo149863

Target Alias Description ECC score Gene Family Method Actions
AT2G06210 ELF8, VIP6 binding 0.03 OrthoFinder output from all 47 species
Als_g28871 ELF8, VIP6 component *(VIP6/CTR9) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Ceric.21G032900.1 Ceric.21G032900 component *(VIP6/CTR9) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
Cre03.g189605 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Ehy_g06197 ELF8, VIP6 component *(VIP6/CTR9) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
LOC_Os07g29360.1 ELF8, VIP6,... component VIP6/CTR9 of PAF1C transcription initiation... 0.04 OrthoFinder output from all 47 species
Solyc07g041510.3.1 ELF8, VIP6,... component VIP6/CTR9 of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
Solyc07g041550.2.1 Solyc07g041550 component VIP6/CTR9 of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
Spa_g12107 ELF8, VIP6 component *(VIP6/CTR9) of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species
Zm00001e007203_P003 ELF8, VIP6,... component VIP6/CTR9 of PAF1C transcription initiation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 343 372
No external refs found!