Smo149035 (CSB3, CLB4, GCPE, HDS, ISPG)

Aliases : CSB3, CLB4, GCPE, HDS, ISPG

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase

Gene families : OG0004404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004404_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo149035

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00175p00057810	CSB3, CLB4,...	Secondary metabolism.terpenoids.methylerythritol...	0.03	OrthoFinder output from all 47 species
Cba_g71707	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.03	OrthoFinder output from all 47 species
Gb_01895	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase	0.02	OrthoFinder output from all 47 species
Len_g16087	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.02	OrthoFinder output from all 47 species
Lfl_g05647	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.02	OrthoFinder output from all 47 species
Mp5g09870.1	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase	0.03	OrthoFinder output from all 47 species
Nbi_g10591	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003885	CSB3, CLB4,...	4-hydroxy-3-methylbut-2-enyl diphosphate synthase &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	IEA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
BP	GO:0009439	cyanate metabolic process	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004588	IspG_bac-typ	36	677

External Links

No external refs found!