Smo143895 (EIF4A-2)

Aliases : EIF4A-2

Description : Protein biosynthesis.translation initiation.mRNA loading.eIF4A mRNA unwinding factor

Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo143895
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AT1G72730	No alias	DEA(D/H)-box RNA helicase family protein	0.06	OrthoFinder output from all 47 species
Als_g07229	EIF4A-2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g03471	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13177	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene17749.t1	EIF4A-2, Aspi01Gene17749	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene51042.t1	EIF4A-2, Aspi01Gene51042	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.21G079100.1	EIF4A-2, Ceric.21G079100	mRNA unwinding factor *(eIF4A)) & original description:...	0.05	OrthoFinder output from all 47 species
Cre03.g199647	EIF4A-III	RNA processing.RNA quality control Exon Junction complex...	0.02	OrthoFinder output from all 47 species
Cre06.g298650	EIF4A-2	Protein biosynthesis.translation initiation.mRNA...	0.02	OrthoFinder output from all 47 species
Dac_g10266	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g21828	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g04610	No alias	mRNA unwinding factor *(eIF4A)) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23612	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g02760.1	EIF4A-2	mRNA unwinding factor (eIF4A)	0.13	OrthoFinder output from all 47 species
Msp_g08580	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g13467	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14903	EIF4A-III	helicase component *(eIF4A3) of RNA quality control Exon...	0.02	OrthoFinder output from all 47 species
Pir_g30240	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c6_1080V3.1	EIF4A-2, Pp3c6_1080	eukaryotic translation initiation factor 4A1	0.05	OrthoFinder output from all 47 species
Pp3c7_3770V3.1	EIF4A-2, Pp3c7_3770	eukaryotic translation initiation factor 4A1	0.01	OrthoFinder output from all 47 species
Sam_g10962	No alias	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g23496	No alias	mRNA unwinding factor *(eIF4A)) & original description: none	0.08	OrthoFinder output from all 47 species
Solyc08g062800.3.1	EIF4A-2, Solyc08g062800	mRNA unwinding factor (eIF4A)	0.15	OrthoFinder output from all 47 species
Solyc12g095990.2.1	EIF4A-2, Solyc12g095990	mRNA unwinding factor (eIF4A)	0.04	OrthoFinder output from all 47 species
Spa_g05950	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g03932	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.08	OrthoFinder output from all 47 species
Tin_g05567	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e030233_P004	EIF4A-2, Zm00001e030233	mRNA unwinding factor (eIF4A)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	64	225

External Links

No external refs found!

Smo143895 (EIF4A-2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation