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  5. Smo143104

Smo143104


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT8 theta subunit


Gene families : OG0006803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo143104
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00079950 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
AT3G03960 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Ala_g08900 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g030085 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Ceric.23G020400.1 Ceric.23G020400 subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.20 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Cre03.g168450 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Dcu_g02964 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01033394001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
LOC_Os03g59020.1 LOC_Os03g59020 CCT8 subunit theta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
MA_100776g0010 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Mp6g01500.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Nbi_g02282 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Ore_g16783 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Sam_g19951 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Solyc01g088080.3.1 Solyc01g088080 CCT8 subunit theta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Zm00001e011242_P002 Zm00001e011242 CCT8 subunit theta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Zm00001e024443_P002 Zm00001e024443 CCT8 subunit theta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 38 526
No external refs found!