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  5. Smo141959

Smo141959 (NHL8)


Aliases : NHL8

Description : Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana


Gene families : OG0005300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo141959

Target Alias Description ECC score Gene Family Method Actions
AT1G32340 NHL8 NDR1/HIN1-like 8 0.03 OrthoFinder output from all 47 species
Gb_07456 NHL8 E3 ubiquitin ligase (ARA54) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50720.1 NHL8, LOC_Os04g50720 E3 ubiquitin ligase (ARA54) 0.02 OrthoFinder output from all 47 species
Spa_g09074 NHL8 E3 ubiquitin ligase *(ARA54) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006575 RWD-domain 84 213
No external refs found!