Smo140818 (ATARFA1B, ARFA1B)

Aliases : ATARFA1B, ARFA1B

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo140818

Target	Alias	Description	ECC score	Gene Family Method
AT1G10630	ATARFA1F, ARFA1F	ADP-ribosylation factor A1F	0.03	OrthoFinder output from all 47 species
AT1G70490	ARFA1D, ATARFA1D	Ras-related small GTP-binding family protein	0.04	OrthoFinder output from all 47 species
AT2G47170	ARF1A1C	Ras-related small GTP-binding family protein	0.03	OrthoFinder output from all 47 species
Adi_g098748	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g07015	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38870	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g14443	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g02408	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g31560	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g49446	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g69136	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g04437	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g27561	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05453	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26837	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g03610.1	ATARFB1B,...	ARF-GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os03g59740.1	ATARFA1B,...	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Lfl_g23069	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
MA_24477g0010	ATARFA1F, ARFA1F	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Mp7g13050.1	ATARFA1F, ARFA1F	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Msp_g20906	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g40990	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g28789	ATARFA1F, ARFA1F	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c10_20740V3.1	ARFA1E,...	ADP-ribosylation factor A1E	0.02	OrthoFinder output from all 47 species
Pp3c4_20623V3.1	ARFA1E,...	ADP-ribosylation factor A1E	0.01	OrthoFinder output from all 47 species
Smo100907	ATARFB1C, ARFB1C	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
Spa_g16801	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08915	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g44186	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e023300_P004	ATARFB1B,...	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e025541_P003	ATARFA1F,...	ARF-GTPase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	5	177

External Links

No external refs found!

Smo140818 (ATARFA1B, ARFA1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation