LOC_Os09g28440 (Os09g0457900)


Aliases : Os09g0457900

Description : 17.5.2 hormone metabolism.ethylene.signal transduction encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein ?//CONTAINS one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os09g28440
Cluster HCCA cluster: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.03 Gene family
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01028050001 No alias No description available 0.03 Gene family
GSVIVT01032961001 No alias No description available 0.03 Gene family
GSVIVT01035098001 No alias No description available 0.03 Gene family
GSVIVT01035852001 No alias No description available 0.04 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os02g32040 Os02g0520000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g51670 Os02g0752800 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g46400 Os04g0549700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.07 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.03 Gene family
MA_10031781g0010 No alias No description available 0.03 Gene family
MA_116185g0010 No alias No description available 0.04 Gene family
MA_132427g0010 No alias No description available 0.03 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_77420g0010 No alias No description available 0.02 Gene family
MA_9260020g0010 No alias No description available 0.02 Gene family
MA_99821g0010 No alias No description available 0.02 Gene family
Solyc01g090320.3.1 Solyc01g090320.3 No description available 0.04 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.02 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.05 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.04 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.03 Gene family
Solyc04g072900.1.1 Solyc04g072900.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc05g052050.1.1 Solyc05g052050.1 No description available 0.04 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc09g066360.1.1 Solyc09g066360.1 No description available 0.04 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d009622 GRMZM2G100982 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d017478 GRMZM2G041839 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d017480 GRMZM5G816314 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d018158 GRMZM2G103085 No description available 0.03 Gene family
Zm00001d018191 GRMZM2G021369 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.04 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.03 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.04 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.06 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.03 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.02 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052102 GRMZM2G097081 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 129 178
No external refs found!