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  5. Smo137981

Smo137981 (ATSMC2)


Aliases : ATSMC2

Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin I/II complex.CAP-E2/SMC2 component


Gene families : OG0005512 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo137981
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00193070 ATSMC2,... Cell cycle.mitosis and meiosis.chromatin... 0.06 OrthoFinder output from all 47 species
AT3G47460 ATSMC2 Structural maintenance of chromosomes (SMC) family protein 0.04 OrthoFinder output from all 47 species
AT5G62410 TTN3, ATSMC4,... structural maintenance of chromosomes 2 0.09 OrthoFinder output from all 47 species
Adi_g117141 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.04 OrthoFinder output from all 47 species
Aev_g40103 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.02 OrthoFinder output from all 47 species
Ala_g23199 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.07 OrthoFinder output from all 47 species
Als_g01195 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.07 OrthoFinder output from all 47 species
Aop_g05581 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene72499.t1 ATSMC2, Aspi01Gene72499 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007776 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.04 OrthoFinder output from all 47 species
Ceric.12G044400.1 ATSMC2, Ceric.12G044400 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Ceric.15G020500.1 ATSMC2, Ceric.15G020500 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.55 TTN3, ATSMC4,... Cell cycle.mitosis and meiosis.chromatin... 0.01 OrthoFinder output from all 47 species
Cre02.g086650 ATSMC2 Cell cycle.mitosis and meiosis.chromatin... 0.02 OrthoFinder output from all 47 species
Dac_g14763 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.05 OrthoFinder output from all 47 species
Dcu_g03186 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.09 OrthoFinder output from all 47 species
GSVIVT01018715001 ATSMC2 Cell cycle.mitosis and meiosis.chromatin... 0.06 OrthoFinder output from all 47 species
Gb_17843 ATSMC2 component CAP-E2/SMC2 of condensin I/II complex 0.07 OrthoFinder output from all 47 species
Len_g12256 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.05 OrthoFinder output from all 47 species
Lfl_g37430 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.08 OrthoFinder output from all 47 species
MA_15346g0010 ATSMC2 component CAP-E2/SMC2 of condensin I/II complex 0.04 OrthoFinder output from all 47 species
Mp1g04330.1 ATSMC2 component CAP-E2/SMC2 of condensin I/II complex 0.05 OrthoFinder output from all 47 species
Msp_g14469 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.09 OrthoFinder output from all 47 species
Nbi_g02470 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.09 OrthoFinder output from all 47 species
Ppi_g29913 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0197.g025517 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.05 OrthoFinder output from all 47 species
Sam_g14601 No alias component *(CAP-E2/SMC2) of condensin I/II complex &... 0.09 OrthoFinder output from all 47 species
Solyc03g093250.2.1 ATSMC2, Solyc03g093250 component CAP-E2/SMC2 of condensin I/II complex 0.03 OrthoFinder output from all 47 species
Solyc03g093260.3.1 ATSMC2, Solyc03g093260 component CAP-E2/SMC2 of condensin I/II complex 0.05 OrthoFinder output from all 47 species
Spa_g41237 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.02 OrthoFinder output from all 47 species
Tin_g10631 ATSMC2 component *(CAP-E2/SMC2) of condensin I/II complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e018930_P001 ATSMC2, Zm00001e018930 component CAP-E2/SMC2 of condensin I/II complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 2 1161
No external refs found!