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  5. Smo137715

Smo137715 (CLPP1, PCLPP)


Aliases : CLPP1, PCLPP

Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component


Gene families : OG0005638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005638_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo137715

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00125230 evm_27.TU.AmTr_v1... ATP-dependent Clp protease proteolytic subunit... 0.07 OrthoFinder output from all 47 species
ATCG00670 CLPP1, PCLPP plastid-encoded CLP P 0.06 OrthoFinder output from all 47 species
Aev_g08306 CLPP1, PCLPP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.09 OrthoFinder output from all 47 species
Aob_g33780 CLPP1, PCLPP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Cba_g08794 CLPP1, PCLPP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.09 OrthoFinder output from all 47 species
Ceric.05G041300.1 CLPP1, PCLPP,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.09 OrthoFinder output from all 47 species
Ceric.05G051000.1 CLPP1, PCLPP,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Ceric.17G015900.1 CLPP1, PCLPP,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.07 OrthoFinder output from all 47 species
Ceric.1Z021300.1 CLPP1, PCLPP,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.07 OrthoFinder output from all 47 species
Ceric.38G007900.1 CLPP1, PCLPP,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.09 OrthoFinder output from all 47 species
Gb_41557 No alias ATP-dependent Clp protease proteolytic subunit OS=Cycas... 0.1 OrthoFinder output from all 47 species
LOC_Os06g39712.1 CLPP1, PCLPP,... proteolytic core component ClpP1/3-6 of chloroplast... 0.1 OrthoFinder output from all 47 species
LOC_Os08g15270.1 CLPP1, PCLPP,... proteolytic core component ClpP1/3-6 of chloroplast... 0.14 OrthoFinder output from all 47 species
LOC_Os10g21300.1 CLPP1, PCLPP,... ATP-dependent Clp protease proteolytic subunit OS=Oryza... 0.15 OrthoFinder output from all 47 species
Lfl_g19263 CLPP1, PCLPP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Mpzg01030.3 CLPP1, PCLPP proteolytic core component ClpP1/3-6 of chloroplast... 0.03 OrthoFinder output from all 47 species
Nbi_g10955 CLPP1, PCLPP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.08 OrthoFinder output from all 47 species
Ore_g40632 CLPP1, PCLPP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Pir_g07483 CLPP1, PCLPP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.07 OrthoFinder output from all 47 species
Sam_g03253 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Tin_g09204 CLPP1, PCLPP EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e003904_P001 CLPP1, PCLPP,... ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.06 OrthoFinder output from all 47 species
Zm00001e042026_P001 CLPP1, PCLPP,... ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.06 OrthoFinder output from all 47 species
Zm00001e042065_P001 CLPP1, PCLPP,... ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.06 OrthoFinder output from all 47 species
Zm00001e042085_P001 CLPP1, PCLPP,... proteolytic core component ClpP1/3-6 of chloroplast... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 42 213
No external refs found!