LOC_Os02g49700.1


Description : transcription factor (HD-ZIP I/II)


Gene families : OG_01_0000146 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000146_tree ,
OG_02_0000061 (LandPlants) Phylogenetic Tree(s): OG_02_0000061_tree ,
OG_03_0000101 (SeedPlants) Phylogenetic Tree(s): OG_03_0000101_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49700.1
Cluster HCCA: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.03 Archaeplastida
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.04 Archaeplastida
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.04 Archaeplastida
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.02 Archaeplastida
GSVIVT01003431001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01019012001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01019655001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_02323 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os03g08960.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os09g21180.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os10g26500.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
MA_130615g0020 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
MA_19453g0050 No alias Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c16_21410V3.1 No alias homeobox 1 0.02 Archaeplastida
Pp3c1_37070V3.1 No alias homeobox protein 16 0.02 Archaeplastida
Pp3c25_13450V3.1 No alias homeobox 1 0.01 Archaeplastida
Pp3c6_2730V3.1 No alias Homeobox-leucine zipper protein family 0.02 Archaeplastida
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc04g005800.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc05g006980.3.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Solyc05g051460.3.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc06g053220.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e002803_P001 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Zm00001e010004_P002 No alias transcription factor (HD-ZIP I/II) 0.01 Archaeplastida
Zm00001e010218_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e012829_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e015717_P003 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e022379_P002 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e034785_P001 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.03 LandPlants
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.04 LandPlants
GSVIVT01003431001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
GSVIVT01019655001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
Gb_02323 No alias transcription factor (HD-ZIP I/II) 0.03 LandPlants
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.02 LandPlants
Solyc02g087840.3.1 No alias transcription factor (HD-ZIP I/II) 0.02 LandPlants
Solyc04g005800.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 LandPlants
Solyc04g074700.4.1 No alias transcription factor (HD-ZIP I/II) 0.02 LandPlants
Solyc05g006980.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 LandPlants
Solyc06g053220.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 LandPlants
Zm00001e010004_P002 No alias transcription factor (HD-ZIP I/II) 0.01 LandPlants
Zm00001e010218_P001 No alias transcription factor (HD-ZIP I/II) 0.03 LandPlants
Zm00001e012829_P001 No alias transcription factor (HD-ZIP I/II) 0.02 LandPlants
Zm00001e015717_P003 No alias transcription factor (HD-ZIP I/II) 0.04 LandPlants
Zm00001e022379_P002 No alias transcription factor (HD-ZIP I/II) 0.02 LandPlants
Zm00001e034785_P001 No alias transcription factor (HD-ZIP I/II) 0.02 LandPlants
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.03 SeedPlants
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.02 SeedPlants
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.03 SeedPlants
GSVIVT01019655001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 SeedPlants
LOC_Os03g08960.1 No alias transcription factor (HD-ZIP I/II) 0.03 SeedPlants
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.02 SeedPlants
Solyc04g005800.3.1 No alias transcription factor (HD-ZIP I/II) 0.01 SeedPlants
Solyc05g006980.3.1 No alias transcription factor (HD-ZIP I/II) 0.02 SeedPlants
Solyc05g007180.3.1 No alias transcription factor (HD-ZIP I/II) 0.01 SeedPlants
Solyc06g053220.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 SeedPlants
Zm00001e010218_P001 No alias transcription factor (HD-ZIP I/II) 0.01 SeedPlants
Zm00001e015717_P003 No alias transcription factor (HD-ZIP I/II) 0.02 SeedPlants
Zm00001e034785_P001 No alias transcription factor (HD-ZIP I/II) 0.02 SeedPlants
Zm00001e038833_P001 No alias transcription factor (HD-ZIP I/II) 0.01 SeedPlants
Zm00001e041342_P001 No alias transcription factor (HD-ZIP I/II) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 132 174
IPR001356 Homeobox_dom 77 130
No external refs found!