LOC_Os02g49700.1

Description : transcription factor (HD-ZIP I/II)

Gene families : OG_01_0000146 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000146_tree ,
OG_02_0000061 (LandPlants) Phylogenetic Tree(s): OG_02_0000061_tree ,
OG_03_0000101 (SeedPlants) Phylogenetic Tree(s): OG_03_0000101_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g49700.1
Cluster	HCCA: Cluster_322

Target	Alias	Description	ECC score	Gene Family Method
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.03	Archaeplastida
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.04	Archaeplastida
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.04	Archaeplastida
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.02	Archaeplastida
GSVIVT01003431001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01019012001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
GSVIVT01019655001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Gb_02323	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os03g08960.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os09g21180.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os10g26500.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
MA_130615g0020	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
MA_19453g0050	No alias	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.03	Archaeplastida
Pp3c16_21410V3.1	No alias	homeobox 1	0.02	Archaeplastida
Pp3c1_37070V3.1	No alias	homeobox protein 16	0.02	Archaeplastida
Pp3c25_13450V3.1	No alias	homeobox 1	0.01	Archaeplastida
Pp3c6_2730V3.1	No alias	Homeobox-leucine zipper protein family	0.02	Archaeplastida
Solyc02g067410.2.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc04g005800.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc05g006980.3.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc05g051460.3.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Solyc06g053220.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e002803_P001	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e010004_P002	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
Zm00001e010218_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e012829_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e015717_P003	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e022379_P002	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e034785_P001	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.03	LandPlants
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.04	LandPlants
GSVIVT01003431001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	LandPlants
GSVIVT01019655001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	LandPlants
Gb_02323	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
Solyc02g067410.2.1	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
Solyc02g087840.3.1	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
Solyc04g005800.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
Solyc04g074700.4.1	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
Solyc05g006980.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
Solyc06g053220.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
Zm00001e010004_P002	No alias	transcription factor (HD-ZIP I/II)	0.01	LandPlants
Zm00001e010218_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	LandPlants
Zm00001e012829_P001	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
Zm00001e015717_P003	No alias	transcription factor (HD-ZIP I/II)	0.04	LandPlants
Zm00001e022379_P002	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
Zm00001e034785_P001	No alias	transcription factor (HD-ZIP I/II)	0.02	LandPlants
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.03	SeedPlants
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.02	SeedPlants
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.03	SeedPlants
GSVIVT01019655001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	SeedPlants
LOC_Os03g08960.1	No alias	transcription factor (HD-ZIP I/II)	0.03	SeedPlants
Solyc02g067410.2.1	No alias	transcription factor (HD-ZIP I/II)	0.02	SeedPlants
Solyc04g005800.3.1	No alias	transcription factor (HD-ZIP I/II)	0.01	SeedPlants
Solyc05g006980.3.1	No alias	transcription factor (HD-ZIP I/II)	0.02	SeedPlants
Solyc05g007180.3.1	No alias	transcription factor (HD-ZIP I/II)	0.01	SeedPlants
Solyc06g053220.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	SeedPlants
Zm00001e010218_P001	No alias	transcription factor (HD-ZIP I/II)	0.01	SeedPlants
Zm00001e015717_P003	No alias	transcription factor (HD-ZIP I/II)	0.02	SeedPlants
Zm00001e034785_P001	No alias	transcription factor (HD-ZIP I/II)	0.02	SeedPlants
Zm00001e038833_P001	No alias	transcription factor (HD-ZIP I/II)	0.01	SeedPlants
Zm00001e041342_P001	No alias	transcription factor (HD-ZIP I/II)	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	132	174
IPR001356	Homeobox_dom	77	130

External Links

No external refs found!

LOC_Os02g49700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation