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  5. Smo122486

Smo122486 (SMU2)


Aliases : SMU2

Description : Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana


Gene families : OG0004764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo122486

Target Alias Description ECC score Gene Family Method Actions
Adi_g023440 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
Aob_g17901 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
Cba_g03955 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
Cre16.g688750 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
Dcu_g04765 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
Gb_08082 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
LOC_Os11g04950.1 SMU2, LOC_Os11g04950 Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
Lfl_g32040 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Ore_g30538 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.04 OrthoFinder output from all 47 species
Solyc07g017490.3.1 SMU2, Solyc07g017490 Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
Zm00001e039187_P001 SMU2, Zm00001e039187 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012492 RED_C 435 538
No external refs found!